| EST name | EST sequence |
| gi|48805921|gb|CO107235.1|CO107235 | AGCAGCTAAGCTTATATCTTAATTAGTAGTAAATTAGAAAGAGAGAGATAGTTCTTACAAATCACAAGGCTTGAGCTAAG CACACAACATGATCGACGAAATACCAACATGATCGACGAAATACTCCAAAGAAAGAAAGATCTTGTATAGCATCATGAGC AATCAGCCTTGCAACTTTTTTTTTTTAATTAAAAAAAATTCGAAAAGTGACTGCTCATGATGTTATATCATTTTTCATCA ATGATGAGATCTCTTGGGTTTTTAATCTTTTTTCTTTTTATTTTTTTTCATCTTCTAATAGTTCTAAATAAAGCCTAGTA ATTCTCCTATCGGAAAAATCCAGCACCCAGAGCAGGGGGAGGTGCCCAGTAATCAGCTCCATTGTCACCACTCCATACTT CAAGCGTGCATGATACTGGAACCAAGCACAGCCCTCTACTCCTCAGGGCTTTCTTTGCTTCTTCTTTACAATCAGATTGT TGTTGGTGCCTCATGTTAGCTGATCCACTGCCCAAGTAAGGTAAGCTGAGAGCCTCAATTTGACTCTGAAGGAATCTGAT GTACCCAATAGCTTCTGACAATACAGACGCTGTGTCAGTCTTCCCGAATGGAGAAACTAGCTGGTGAAGTGATGTAATCC TGTCTCCTAATTTTTCCTTCCTCACCTTTAAGGTAGATTGGGTTGCAGAAGGTTGAACCCTAGGCTTCTTCAATGGCCCC CCTGTTGC |
Most similar to sp|Q8S3D1|BH068_ARATH
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q8H5X5|SCAM1_ORYSJ Secretory carrier-associated membrane protein
1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1
Length = 306
Score = 101 bits (251), Expect(2) = 2e-28
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +1
Query: 100 GSSYFVGFGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAAF 252
G YFVGFGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAAF
Sbjct: 256 GIFYFVGFGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAAF 306
Score = 44.3 bits (103), Expect(2) = 2e-28
Identities = 23/33 (69%), Positives = 23/33 (69%)
Frame = +3
Query: 9 SAVAPPVASRGNHWRGFYQAIDLISKNALVGIF 107
SAVAPPV G G AIDLISKNALVGIF
Sbjct: 226 SAVAPPVVFEGKSLAGILPAIDLISKNALVGIF 258
>sp|A2YMP7|SCAM1_ORYSI Putative secretory carrier-associated
membrane protein 1 OS=Oryza sativa subsp. indica
GN=SCAMP1 PE=3 SV=1
Length = 306
Score = 101 bits (251), Expect(2) = 2e-28
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +1
Query: 100 GSSYFVGFGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAAF 252
G YFVGFGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAAF
Sbjct: 256 GIFYFVGFGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAAF 306
Score = 44.3 bits (103), Expect(2) = 2e-28
Identities = 23/33 (69%), Positives = 23/33 (69%)
Frame = +3
Query: 9 SAVAPPVASRGNHWRGFYQAIDLISKNALVGIF 107
SAVAPPV G G AIDLISKNALVGIF
Sbjct: 226 SAVAPPVVFEGKSLAGILPAIDLISKNALVGIF 258
>sp|Q7F613|SCAM2_ORYSJ Secretory carrier-associated membrane protein
2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1
Length = 286
Score = 89.4 bits (220), Expect(2) = 9e-23
Identities = 42/51 (82%), Positives = 47/51 (92%)
Frame = +1
Query: 100 GSSYFVGFGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAAF 252
G YF+GFGLFC+ESLLS+ VIQQVYMYFRGSGKAAEMKR+A RGAMR+AF
Sbjct: 236 GIFYFIGFGLFCLESLLSVVVIQQVYMYFRGSGKAAEMKREAARGAMRSAF 286
Score = 37.4 bits (85), Expect(2) = 9e-23
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +3
Query: 9 SAVAPPVASRGNHWRGFYQAIDLISKNALVGIF 107
SAVAPP +G G AID+I NA+VGIF
Sbjct: 206 SAVAPPFPFKGKSLAGILPAIDVIGNNAIVGIF 238
>sp|Q60EA5|SCAM3_ORYSJ Secretory carrier-associated membrane protein
3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1
Length = 282
Score = 87.0 bits (214), Expect(2) = 2e-21
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +1
Query: 100 GSSYFVGFGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAAF 252
G YFVGFGLFC+ESLLSI VIQQVYMYFRGSGKAAEMKR+A RGA+ +AF
Sbjct: 232 GIFYFVGFGLFCLESLLSIGVIQQVYMYFRGSGKAAEMKREAARGALSSAF 282
Score = 35.0 bits (79), Expect(2) = 2e-21
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 9 SAVAPPVASRGNHWRGFYQAIDLISKNALVGIF 107
+AVAPP +G G AID+I ++A+VGIF
Sbjct: 202 AAVAPPFPFKGKSLAGILPAIDVIGRSAIVGIF 234
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis
thaliana GN=BHLH68 PE=2 SV=2
Length = 407
Score = 165 bits (418), Expect = 3e-40
Identities = 102/166 (61%), Positives = 110/166 (66%), Gaps = 37/166 (22%)
Frame = -1
Query: 722 GGPLKKPRVQPS-ATQSTLKVRKEKLGDRITSLHQLVSPFGKTDTASVLSEAIGYIRFLQ 546
G KKPR+QPS ++QSTLKVRKEKLG RI +LHQLVSPFGKTDTASVLSEAIGYIRFLQ
Sbjct: 244 GSTNKKPRLQPSPSSQSTLKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQ 303
Query: 545 SQIEALSLPYLG-SGSANMRHQQ----------------------------------QSD 471
SQIEALS PY G + S NMRHQQ +
Sbjct: 304 SQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQN 363
Query: 470 CKEEAKKALRSRGLCLVPVSCTLEVWSGDNGADYWAPPPALG-AGF 336
EE KK LRSRGLCLVP+SCTL+V S DNGADYWA PALG AGF
Sbjct: 364 ASEEPKKDLRSRGLCLVPISCTLQVGS-DNGADYWA--PALGSAGF 406